使用方法:

Rscript network.r -h
usage: network.r [-h] -e filepath -v filepath -f from -t to -w weight -g group
                 [--isolated] [-l style] [--label.node] [--sub_label.node]
                 [-o path] [-n prefix] [-H number] [-W number]

network plot:https://www.omicsclass.com/article/1531

optional arguments:
  -h, --help            show this help message and exit
  -e filepath, --edge filepath
                        input the edge information of network,[required]
  -v filepath, --vertex filepath
                        input the vertex information of network,[required]
  -f from, --from from  the name of the start gene column [required]
  -t to, --to to        the name of the end gene column[required]
  -w weight, --combined_score weight
                        the name of the edge weight column[required]
  -g group, --group group
                        input group id in vertex file, can set multi
                        groups[required]
  --isolated            delete isolated vertex [optional, default: False]
  -l style, --layout style
                        set Network display style,c('star', 'circle', 'gem',
                        'dh', 'graphopt', 'grid', 'mds', 'randomly', 'fr',
                        'kk', 'drl', 'lgl'),[default fr]
  --label.node          show node name [optional, default: TRUE]
  --sub_label.node      show node name of sub-network [optional, default:
                        TRUE]
  -o path, --outdir path
                        output file directory [default cwd]
  -n prefix, --name prefix
                        out file name prefix [default demo]
  -H number, --height number
                        the height of pic inches [default 12]
  -W number, --width number
                        the width of pic inches [default 12]