* installing *source* package ‘sf’ ... ** package ‘sf’ successfully unpacked and MD5 sums checked ** using staged installation configure: CC: /share/work/biosoft/gcc/gcc-v6.4.0/bin/gcc configure: CXX: g++ -std=gnu++11 checking for gdal-config... no no configure: error: gdal-config not found or not executable. ERROR: configuration failed for package ‘sf’ * removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/sf’ ERROR: dependency ‘sf’ is not available for package ‘spdep’ * removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/spdep’ ERROR: dependency ‘spdep’ is not available for package ‘adegenet’ * removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/adegenet’ The downloaded source packages are in ‘/tmp/RtmpuYCUHI/downloaded_packages’ Updating HTML index of packages in '.Library' Making 'packages.html' ... done Warning messages: 1: In install.packages("adegenet") : installation of package ‘sf’ had non-zero exit status 2: In install.packages("adegenet") : installation of package ‘spdep’ had non-zero exit status 3: In install.packages("adegenet") : installation of package ‘adegenet’ had non-zero exit status
缺少必要的包,安装以下:
yum install gdal gdal-devel
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