参考基因组里除了ACTGN以外,还会看到其他一些字符,看一下这些字符都代表什么?
DNA:
Nucleotide Code: Base:
---------------- -----
A.................Adenine
C.................Cytosine
G.................Guanine
T (or U)..........Thymine (or Uracil)
R.................A or G
Y.................C or T
S.................G or C
W.................A or T
K.................G or T
M.................A or C
B.................C or G or T
D.................A or G or T
H.................A or C or T
V.................A or C or G
N.................any base
. or -............gap
氨基酸都有了,怎么能少了蛋白质!
Protein:
Amino Acid Code: Three letter Code: Amino Acid:
---------------- ------------------ -----------
A.................Ala.................Alanine(丙氨酸)
B.................Asx.................Aspartic acid or Asparagine(天冬氨酸或天冬酰胺)
C.................Cys.................Cysteine(半胱氨酸)
D.................Asp.................Aspartic Acid(天冬氨酸)
E.................Glu.................Glutamic Acid(谷氨酸)
F.................Phe.................Phenylalanine(苯丙氨酸)
G.................Gly.................Glycine(甘氨酸)
H.................His.................Histidine(组氨酸)
I.................Ile.................Isoleucine(异亮氨酸)
K.................Lys.................Lysine(赖氨酸)
L.................Leu.................Leucine(亮氨酸)
M.................Met.................Methionine(甲硫氨酸)
N.................Asn.................Asparagine(天冬酰胺)
P.................Pro.................Proline(脯氨酸)
Q.................Gln.................Glutamine(谷氨酰胺)
R.................Arg.................Arginine(精氨酸)
S.................Ser.................Serine(丝氨酸)
T.................Thr.................Threonine(苏氨酸)
V.................Val.................Valine(缬氨酸)
W.................Trp.................Tryptophan(色氨酸)
X.................Xaa.................Any amino acid(任何氨基酸)
Y.................Tyr.................Tyrosine(酪氨酸)
Z.................Glx.................Glutamine or Glutamic acid(谷氨酰胺或谷氨酸)
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