Traceback (most recent call last):
File "/share/work/biosoft/python/Python3/bin/wgd", line 33, in <module>
sys.exit(load_entry_point('wgd==1.2', 'console_scripts', 'wgd')())
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/click/core.py", line 1130, in __call__
return self.main(*args, **kwargs)
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/click/core.py", line 1055, in main
rv = self.invoke(ctx)
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/click/core.py", line 1657, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/click/core.py", line 1404, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/click/core.py", line 760, in invoke
return __callback(*args, **kwargs)
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/wgd_cli.py", line 851, in syn
syn_(
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/wgd_cli.py", line 942, in syn_
syntenic_dotplot(
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/wgd/viz.py", line 245, in syntenic_dotplot
x = [genomic_elements[curr_list_x] + x for x in
File "/share/work/biosoft/python/Python-v3.9.16/lib/python3.9/site-packages/wgd/viz.py", line 245, in <listcomp>
x = [genomic_elements[curr_list_x] + x for x in
KeyError: 6.0
wgd_cli.py程序bug,如果GFF中染色体名称全部是数字,会读成数字,导致出错
如果觉得我的文章对您有用,请随意打赏。你的支持将鼓励我继续创作!