3 基因串联

两个基因之间夹带了一个其它基因它们还算是串联复制吗


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3 个回答

Daitoue

确定一下这个基因是不是确实是位置处于二者之间,同时看看这三个基因之间两两之间确定没有发现其他的串联复制么?

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陈塘关山渣

基因在两者之间 没有其它复制


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omicsgene - 生物信息
擅长:重测序,遗传进化,转录组,GWAS

1.可以用全基因组的方法,就是MCScanX分析的方法;

2.blast方法,串联重复与大片段复制定义如下:

Gene duplications are considered to be one of the primary driving forces in the evolution of genomes and genetic systems [22]. Duplicated genes provide raw material for the generation of new genes, which, in turn, facilitate the generation of new functions. Segmental duplication, tandem duplication, and transposition events, such as retroposition and replicative transposition [23], are considered to represent three principal evolutionary patterns. Of these patterns, segmental and tandem duplications have been suggested to represent two of the main causes of gene family expansion in plants [24]. Segmental duplications multiple genes through polyploidy followed by chromosome rearrangements [25]. It occurs most frequently in plants because most plants are diploidized polyploids and retain numerous duplicated chromosomal blocks within their genomes [24]. Tandem duplications were characterized as multiple members of one family occurring within the same intergenic region or in neighboring intergenic regions [26]. In this study, we defined tandem duplicated genes as adjacent homologous genes on a single chromosome, with no more than one intervening gene. For this analysis, we focused on segmental and tandem duplication events. To gain a greater insight about the expansion pattern of soybean expansin genes in this huge gene family, we identified tandem duplicated clusters based on the gene locus, and searched the Plant Genome Duplication Database [27] to locate segmentally duplicated pairs.

参考文献:

3.blast方法,串联重复与大片段复制判断方法如下:

https://link.springer.com/article/10.1007/s00425-016-2575-6 

attachments-2018-07-DpZfkJgs5b4172e8807ac.jpg


更多基因家族:学习链接:基因家族分析实操课程基因家族文献思路解读

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