物种是拟南芥和水稻;
使用单个物种(拟南芥)时绘图正常;我把二者的GTF文件合并想一起绘图,却出现了一下错误:
=========================================
==============A Big Warniing=============
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IDs that you used as input do
NOT present in gff/gtf file.
Examples of valid IDs is showed as bellowed
Guess FileType is:GTF
transcript:AT1G03987.1
transcript:AT1G01020.6
transcript:AT1G01010.1
transcript:AT1G01020.3
transcript:AT1G01020.2
transcript:AT1G01020.5
transcript:AT1G01020.4
transcript:AT1G01020.1
transcript:AT1G01030.2
transcript:AT1G01030.1
transcript:AT1G01040.1
=========================================
六月 21, 2020 10:39:33 上午 biocjava.bioDoer.MEME.DrawMotifPattern.DrawGeneStructureFromGXFfile metaParser
严重: null
java.io.IOException: Parsing Gxf Error...See above...
at biocjava.bioDoer.MEME.DrawMotifPattern.DrawGeneStructureFromGXFfile.metaParser(DrawGeneStructureFromGXFfile.java:87)
at biocjava.bioDoer.MEME.DrawMotifPattern.DrawMotifPatternFromMEMEResult.postGraph(DrawMotifPatternFromMEMEResult.java:1020)
at biocjava.bioDoer.MEME.DrawMotifPattern.DrawAmazingMetaPlot.plot(DrawAmazingMetaPlot.java:617)
at biocjava.GUIexcutors.JIGplotToolkit.AmazingGeneViewGUIPanel$15$1.run(AmazingGeneViewGUIPanel.java:490)
六月 21, 2020 10:39:33 上午 biocjava.GUIexcutors.JIGplotToolkit.AmazingGeneViewGUIPanel$15$1 run
严重: null
java.lang.NullPointerException
at biocjava.bioDoer.MEME.DrawMotifPattern.DrawMotifPatternFromMEMEResult.postGraph(DrawMotifPatternFromMEMEResult.java:1029)
at biocjava.bioDoer.MEME.DrawMotifPattern.DrawAmazingMetaPlot.plot(DrawAmazingMetaPlot.java:617)
at biocjava.GUIexcutors.JIGplotToolkit.AmazingGeneViewGUIPanel$15$1.run(AmazingGeneViewGUIPanel.java:490)
(更新:进化树+motif 二连图)