这个需要了解一下TCGA的样品编码方式(barcode):
其中sample 指示的位置,标记了不同的样品类型,具体如下表所示:
01 | Primary Solid Tumor | TP(实体瘤) |
02 | Recurrent Solid Tumor | TR |
03 | Primary Blood Derived Cancer - Peripheral Blood | TB (血液相关癌) |
04 | Recurrent Blood Derived Cancer - Bone Marrow | TRBM |
05 | Additional - New Primary | TAP |
06 | Metastatic | TM |
07 | Additional Metastatic | TAM |
08 | Human Tumor Original Cells | THOC |
09 | Primary Blood Derived Cancer - Bone Marrow | TBM |
10 | Blood Derived Normal | NB (血液癌,正常) |
11 | Solid Tissue Normal | NT(实体瘤,正常) |
12 | Buccal Cell Normal | NBC |
13 | EBV Immortalized Normal | NEBV |
14 | Bone Marrow Normal | NBM |
15 | sample type 15 | 15SH |
16 | sample type 16 | 16SH |
20 | Control Analyte | CELLC |
40 | Recurrent Blood Derived Cancer - Peripheral Blood | TRB |
50 | Cell Lines | CELL |
60 | Primary Xenograft Tissue | XP |
61 | Cell Line Derived Xenograft Tissue | XCL |
99 | sample type 99 | 99SH |