tassel 运行报错 The fixed effect design matrix has less than full column rank. The analysis will not be run.

代码如下：

run_pipeline.pl -fork1 -h all.hmp -fork2 -r trait.txt -fork3 -q population_structure.txt -fork4 -k kinship.txt -combine5 -input1 -input2 -input3 -intersect -combine6 -input5 -input4 -mlm -export mlmkq -runfork1 -runfork2 -runfork3 -runfork4

运行后：

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分类：GWAS

默认排序时间排序

1 个回答

omicsgene - 生物信息 2022-10-04 08:07

擅长：重测序,遗传进化,转录组,GWAS

population_structure.txt 这个文件的样本数量，和其他文件的样本数量不是一样的吧，你检查一下；

tassel 运行报错 The fixed effect design matrix has less than full column rank. The analysis will not be run.

1 个回答

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