使用singularity exec /share/singularity_images/ampliseq-q2_v1.4.sif /biosoft/miniconda/envs/picrust2/bin/picrust2_pipeline.py 命令报错

老师，您好！使用singularity exec /share/singularity_images/ampliseq-q2_v1.4.sif /biosoft/miniconda/envs/picrust2/bin/picrust2_pipeline.py 运行课程中的命令时，出现如下报错界面

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1 个回答

omicsgene - 生物信息 2022-11-17 11:36

擅长：重测序,遗传进化,转录组,GWAS

singularity shell 交互式运行，加环境变量试试：

export PATH=/biosoft/miniconda/envs/picrust2/bin/:$PATH