*** CIRCOS ERROR ***
cwd: /work/cm01_reseq_demo/8.circos
command: /biosoft/miniconda/envs/reseq/bin/circos -conf
/work/cm01_reseq_demo/8.circos/circos.conf -outputdir
/work/cm01_reseq_demo/8.circos -outputfile circos
CONFIGURATION FILE ERROR
Could not parse value for configuration parameter [max] in block [plot]. The
location in the configuration is shown above.
If you are having trouble debugging this error, first read the best practices
tutorial for helpful tips that address many common problems
http://www.circos.ca/documentation/tutorials/reference/best_practices
The debugging facility is helpful to figure out what's happening under the
hood
http://www.circos.ca/documentation/tutorials/configuration/debugging
If you're still stumped, get support in the Circos Google Group.
http://groups.google.com/group/circos-data-visualization
Please include this error, all your configuration, data files and the version
of Circos you're running (circos -v). Do not email me directly -- please use
the group.
Stack trace:
at /biosoft/miniconda/envs/reseq/bin/../lib/Circos/Error.pm line 425.
Circos::Error::fatal_error("configuration", "undefined_string", "max", "plot") called at /biosoft/miniconda/envs/reseq/bin/../lib/Circos/Configuration.pm line 649
Circos::Configuration::parse_field(undef, "max", "plot", HASH(0x55f21bec5910), HASH(0x55f21bf82b68)) called at /biosoft/miniconda/envs/reseq/bin/../lib/Circos/Configuration.pm line 615
Circos::Configuration::repopulateconfiguration(HASH(0x55f21bec5910), "plot", HASH(0x55f21bf7d4c8), HASH(0x55f21bf7c5d0), 1) called at /biosoft/miniconda/envs/reseq/bin/../lib/Circos/Configuration.pm line 600
Circos::Configuration::repopulateconfiguration(HASH(0x55f21bf7d4c8), "plots", HASH(0x55f21b1c45c0), HASH(0x55f21bd4d2f8), 1) called at /biosoft/miniconda/envs/reseq/bin/../lib/Circos/Configuration.pm line 594
Circos::Configuration::repopulateconfiguration(HASH(0x55f21b1c45c0), undef, undef, undef, 1) called at /biosoft/miniconda/envs/reseq/bin/../lib/Circos/Configuration.pm line 290
Circos::Configuration::populateconfiguration("_argv", "-conf /work/cm01_reseq_demo/8.circos/circos.conf -outputdir /"..., "debug_group", "output,summary", "outputfile", "circos", "configfile", "/work/cm01_reseq_demo/8.circos/circos.conf", ...) called at /biosoft/miniconda/envs/reseq/bin/../lib/Circos.pm line 153
Circos::run("Circos", "_cwd", "/work/cm01_reseq_demo/8.circos", "outputdir", "/work/cm01_reseq_demo/8.circos", "configfile", "/work/cm01_reseq_demo/8.circos/circos.conf", "outputfile", ...) called at /biosoft/miniconda/envs/reseq/bin/circos line 536