利用cicro绘图时遇到错误

老师您好,我在基因家族分析使用命令进行绘图时发现运行错误,错误代码如下,请您帮我查看一下,谢谢老师。

 *** CIRCOS ERROR ***


      cwd: /work/my_gene_family/09.circos


      command: /share/work/biosoft/circos/latest/bin/circos -conf config.txt

      -outputdir ./ -outputfile HSP90


  You have asked to draw [1190] ideograms, but the maximum is currently set at

  [200]. To increase this number change max_ideograms in etc/housekeeping.conf.

  Keep in mind that drawing that many ideograms may create an image that is too

  busy and uninterpretable.


  If you are having trouble debugging this error, first read the best practices

  tutorial for helpful tips that address many common problems


      http://www.circos.ca/documentation/tutorials/reference/best_practices


  The debugging facility is helpful to figure out what's happening under the

  hood


      http://www.circos.ca/documentation/tutorials/configuration/debugging


  If you're still stumped, get support in the Circos Google Group.


      http://groups.google.com/group/circos-data-visualization


  Please include this error, all your configuration, data files and the version

  of Circos you're running (circos -v). Do not email me directly -- please use

  the group.


  Stack trace:

 at /share/work/biosoft/circos/circos-0.69-9/bin/../lib/Circos/Error.pm line 425, <F> line 1190.

        Circos::Error::fatal_error("ideogram", "max_number", 1190, 200) called at /share/work/biosoft/circos/circos-0.69-9/bin/../lib/Circos.pm line 342

        Circos::run("Circos", "outputdir", "./", "outputfile", "HSP90", "configfile", "config.txt", "_cwd", ...) called at /share/work/biosoft/circos/latest/bin/circos line 536

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1 个回答

omicsgene - 生物信息
擅长:重测序,遗传进化,转录组,GWAS

你输入的数据有问题,染色体太多了太多了,绘制不了,有些scaffold就不要放进去绘制了;

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  • 王一 提出于 2023-12-04 22:21

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