Rscript go.dote.R -i LGO.txt -o result -n speci -H 6 -W 7 -T godote

Warning messages:

1: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  :

  EOF within quoted string

2: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  :

  number of items read is not a multiple of the number of columns

Error in `[<-.data.frame`(`*tmp*`, GO$Pvalue == 0, "Pvalue", value = 1e-15) : 

  missing values are not allowed in subscripted assignments of data frames

Calls: [<- -> [<-.data.frame

Execution halted